PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf01633g02002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family WOX
Protein Properties Length: 331aa    MW: 37648.6 Da    PI: 7.4261
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf01633g02002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox702.9e-2278137357
                               --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                  Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                               +R+++t+eql++Leel+++ +r+psae++++++++l    +++ ++V++WFqN++a+e++
  Peinf101Scf01633g02002.1  78 SRWNPTPEQLQTLEELYRRgTRTPSAEQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 137
                               7*****************99**************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003892.5E-575142IPR001356Homeobox domain
SuperFamilySSF466892.18E-1278142IPR009057Homeodomain-like
PfamPF000465.2E-2078137IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.604.2E-978137IPR009057Homeodomain-like
CDDcd000865.39E-779139No hitNo description
PROSITE profilePS5007111.25683138IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048513Biological Processanimal organ development
GO:0099402Biological Processplant organ development
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MWMMGYNDGG DFNMPDSFNG RKLRPLMPRI PHVPTATSPT NCLRSIHGDN FIALNHHQLG  60
MSEPNKRDYN TQQLVVSSRW NPTPEQLQTL EELYRRGTRT PSAEQIQHIT AQLRRYGKIE  120
GKNVFYWFQN HKARERQKRR RQLESNAAND GGGGDEQSRN NCNVENTERK DSGTGANRTG  180
FEIEQTKNWP SPTNCSTLSP EMMHLSCSPP TPHNHMNNSS ASNTITTTTT IISSPSTPRT  240
MEPKQFPKVK DHLNIFITPF RTDDHSKHSL SEIHGDSQTL ELFPLRSNNE INDENNISEK  300
DDIEISGAVA TSNTNFSGSN YQFFEFLPLK N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU3590040.0EU359004.1 Petunia x hybrida MAEWEST protein (WOX1) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009587628.11e-172PREDICTED: WUSCHEL-related homeobox 1
RefseqXP_016474400.11e-172PREDICTED: WUSCHEL-related homeobox 1-like
TrEMBLC0IN070.0C0IN07_PETHY; MAEWEST protein
STRINGPGSC0003DMT4000144641e-147(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46812342
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.11e-55WUSCHEL related homeobox 1